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skbio.sequence.Sequence
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.. currentmodule:: skbio.sequence

.. autoclass:: Sequence

   
   .. rubric:: Attributes

   .. autosummary::
   
      ~Sequence.default_write_format
      ~Sequence.interval_metadata
      ~Sequence.metadata
      ~Sequence.observed_chars
      ~Sequence.positional_metadata
      ~Sequence.values
   

   
   .. rubric:: Built-ins

   .. autosummary::
      :toctree:
   
      ~Sequence.__bool__
      ~Sequence.__contains__
      ~Sequence.__copy__
      ~Sequence.__deepcopy__
      ~Sequence.__eq__
      ~Sequence.__ge__
      ~Sequence.__getitem__
      ~Sequence.__getstate__
      ~Sequence.__gt__
      ~Sequence.__iter__
      ~Sequence.__le__
      ~Sequence.__len__
      ~Sequence.__lt__
      ~Sequence.__ne__
      ~Sequence.__reversed__
      ~Sequence.__str__
   

   
   .. rubric:: Methods

   .. autosummary::
      :toctree:
   
      
      
      ~Sequence.concat
      
      
      ~Sequence.count
      
      
      ~Sequence.distance
      
      
      ~Sequence.find_with_regex
      
      
      ~Sequence.frequencies
      
      
      ~Sequence.has_interval_metadata
      
      
      ~Sequence.has_metadata
      
      
      ~Sequence.has_positional_metadata
      
      
      ~Sequence.index
      
      
      ~Sequence.iter_contiguous
      
      
      ~Sequence.iter_kmers
      
      
      ~Sequence.kmer_frequencies
      
      
      ~Sequence.lowercase
      
      
      ~Sequence.match_frequency
      
      
      ~Sequence.matches
      
      
      ~Sequence.mismatch_frequency
      
      
      ~Sequence.mismatches
      
      
      ~Sequence.read
      
      
      ~Sequence.replace
      
      
      ~Sequence.write
      
   